STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tspan17Tetraspanin. (270 aa)    
Predicted Functional Partners:
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.650
ENSPNYP00000019921
Sema domain-containing protein.
    
  0.650
ENSPNYP00000019946
Protein kinase domain-containing protein.
    
  0.650
mst1r
Macrophage stimulating 1 receptor b.
    
  0.650
adam10
Uncharacterized protein.
   
 0.583
LOC102193340
ADAM metallopeptidase domain 10b.
   
 0.583
LOC102196452
Uncharacterized protein.
   
 
  0.479
il7r
Fibronectin type-III domain-containing protein.
   
 
  0.477
LOC102196976
Uncharacterized protein.
   
 
  0.473
LOC102206645
Uncharacterized protein.
   
 
  0.473
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.