STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wdr17WD repeat domain 17. (1263 aa)    
Predicted Functional Partners:
brix1
Brix domain containing 2.
   
 
 0.955
ENSPNYP00000014227
Uncharacterized protein.
   
 
 0.938
ebna1bp2
EBNA1 binding protein 2.
   
 
 0.937
noc2l
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.915
gtpbp4
GTP binding protein 4.
   
 
 0.912
pdcd11
Programmed cell death 11.
   
 
 0.905
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.904
tbl3
Transducin (beta)-like 3.
   
  
0.904
gnl2
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily.
   
 
 0.898
pum3
Pumilio RNA-binding family member 3.
   
 
 0.892
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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