STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNYP00000002548Si:ch211-265g22.4. (156 aa)    
Predicted Functional Partners:
SRF
Serum response factor.
    
 0.646
LOC102208386
MADS-box domain-containing protein.
    
 0.646
ENSPNYP00000021647
Paired domain-containing protein.
  
 
 
 0.592
runx3
Runt-related transcription factor.
   
 0.584
ENSPNYP00000013839
Runt domain-containing protein.
   
 0.584
LOC102192018
Runt-related transcription factor.
   
 0.584
runx2
Runt-related transcription factor.
   
 0.584
LOC102209963
Mitogen-activated protein kinase.
    
 0.582
mapk8
Mitogen-activated protein kinase.
    
 0.582
mapk10
Mitogen-activated protein kinase.
    
 0.582
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.