STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102201537Four and a half LIM domains 3b. (279 aa)    
Predicted Functional Partners:
LOC102207590
Vang-like protein.
    
 0.651
VANGL2
Vang-like protein.
    
 0.651
LOC102215885
Vang-like protein.
    
 0.651
VANGL1
Vang-like protein.
    
 0.651
LOC102199972
Dishevelled segment polarity protein 3a.
    
 0.650
dvl1
Dishevelled segment polarity protein 1a.
    
 0.650
LOC102202272
Dishevelled segment polarity protein 2.
    
 0.650
dvl3
Uncharacterized protein.
    
 0.650
afdn
Afadin, adherens junction formation factor a.
    
 0.579
psmd3
Proteasome 26S subunit, non-ATPase 3.
    
  0.478
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.