Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AREL1 | abcd4 | ENSPNYP00000028999 | ENSPNYP00000010987 | Apoptosis resistant E3 ubiquitin protein ligase 1. | ATP-binding cassette, sub-family D (ALD), member 4. | 0.461 |
AREL1 | vrtn | ENSPNYP00000028999 | ENSPNYP00000003769 | Apoptosis resistant E3 ubiquitin protein ligase 1. | Vertebrae development associated. | 0.445 |
abcd4 | AREL1 | ENSPNYP00000010987 | ENSPNYP00000028999 | ATP-binding cassette, sub-family D (ALD), member 4. | Apoptosis resistant E3 ubiquitin protein ligase 1. | 0.461 |
abcd4 | vrtn | ENSPNYP00000010987 | ENSPNYP00000003769 | ATP-binding cassette, sub-family D (ALD), member 4. | Vertebrae development associated. | 0.533 |
c9orf72 | vrtn | ENSPNYP00000004944 | ENSPNYP00000003769 | Zgc:100846. | Vertebrae development associated. | 0.422 |
nr6a1 | vrtn | ENSPNYP00000007340 | ENSPNYP00000003769 | Nuclear receptor subfamily 6, group A, member 1a. | Vertebrae development associated. | 0.410 |
sybu | vrtn | ENSPNYP00000006459 | ENSPNYP00000003769 | Syntabulin (syntaxin-interacting). | Vertebrae development associated. | 0.510 |
tmem192 | vrtn | ENSPNYP00000018547 | ENSPNYP00000003769 | Transmembrane protein 192. | Vertebrae development associated. | 0.550 |
vrtn | AREL1 | ENSPNYP00000003769 | ENSPNYP00000028999 | Vertebrae development associated. | Apoptosis resistant E3 ubiquitin protein ligase 1. | 0.445 |
vrtn | abcd4 | ENSPNYP00000003769 | ENSPNYP00000010987 | Vertebrae development associated. | ATP-binding cassette, sub-family D (ALD), member 4. | 0.533 |
vrtn | c9orf72 | ENSPNYP00000003769 | ENSPNYP00000004944 | Vertebrae development associated. | Zgc:100846. | 0.422 |
vrtn | nr6a1 | ENSPNYP00000003769 | ENSPNYP00000007340 | Vertebrae development associated. | Nuclear receptor subfamily 6, group A, member 1a. | 0.410 |
vrtn | sybu | ENSPNYP00000003769 | ENSPNYP00000006459 | Vertebrae development associated. | Syntabulin (syntaxin-interacting). | 0.510 |
vrtn | tmem192 | ENSPNYP00000003769 | ENSPNYP00000018547 | Vertebrae development associated. | Transmembrane protein 192. | 0.550 |
vrtn | wdr92 | ENSPNYP00000003769 | ENSPNYP00000011742 | Vertebrae development associated. | WD repeat domain 92. | 0.412 |
wdr92 | vrtn | ENSPNYP00000011742 | ENSPNYP00000003769 | WD repeat domain 92. | Vertebrae development associated. | 0.412 |