Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPNYP00000006269 | bdnf | ENSPNYP00000006269 | ENSPNYP00000007061 | Uncharacterized protein. | Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. | 0.471 |
ENSPNYP00000006269 | nrn1 | ENSPNYP00000006269 | ENSPNYP00000003953 | Uncharacterized protein. | Neuritin 1a. | 0.416 |
bdnf | ENSPNYP00000006269 | ENSPNYP00000007061 | ENSPNYP00000006269 | Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. | Uncharacterized protein. | 0.471 |
bdnf | nrn1 | ENSPNYP00000007061 | ENSPNYP00000003953 | Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. | Neuritin 1a. | 0.463 |
gpnmb | nrn1 | ENSPNYP00000026832 | ENSPNYP00000003953 | Glycoprotein (transmembrane) nmb. | Neuritin 1a. | 0.429 |
nrn1 | ENSPNYP00000006269 | ENSPNYP00000003953 | ENSPNYP00000006269 | Neuritin 1a. | Uncharacterized protein. | 0.416 |
nrn1 | bdnf | ENSPNYP00000003953 | ENSPNYP00000007061 | Neuritin 1a. | Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. | 0.463 |
nrn1 | gpnmb | ENSPNYP00000003953 | ENSPNYP00000026832 | Neuritin 1a. | Glycoprotein (transmembrane) nmb. | 0.429 |
nrn1 | vwc2 | ENSPNYP00000003953 | ENSPNYP00000006066 | Neuritin 1a. | Von Willebrand factor C domain containing 2. | 0.520 |
vwc2 | nrn1 | ENSPNYP00000006066 | ENSPNYP00000003953 | Von Willebrand factor C domain containing 2. | Neuritin 1a. | 0.520 |