STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102198172G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (354 aa)    
Predicted Functional Partners:
ENSPNYP00000018997
Uncharacterized protein.
    
  0.661
haus3
HAUS augmin-like complex, subunit 3.
    
 0.488
nts
Neurotensin.
    
  0.478
haus1
HAUS augmin-like complex, subunit 1.
    
 0.477
LOC102209332
Prepronociceptin a.
    
  0.475
ENSPNYP00000029814
Uncharacterized protein.
    
  0.473
LOC102195116
Uncharacterized protein.
    
  0.423
LOC102204648
Uncharacterized protein.
    
  0.423
POMC
Proopiomelanocortin.
    
  0.423
edn1
Endothelin 1.
    
  0.421
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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