Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPNYP00000031391 | LOC102208376 | ENSPNYP00000031391 | ENSPNYP00000021424 | Uncharacterized protein. | Si:ch211-266g18.9. | 0.968 |
ENSPNYP00000031391 | tgfbrap1 | ENSPNYP00000031391 | ENSPNYP00000003131 | Uncharacterized protein. | Transforming growth factor, beta receptor associated protein 1. | 0.968 |
ENSPNYP00000031391 | vipas39 | ENSPNYP00000031391 | ENSPNYP00000008842 | Uncharacterized protein. | VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog. | 0.407 |
ENSPNYP00000031391 | vps11 | ENSPNYP00000031391 | ENSPNYP00000002166 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. | 0.991 |
ENSPNYP00000031391 | vps16 | ENSPNYP00000031391 | ENSPNYP00000004105 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | 0.992 |
ENSPNYP00000031391 | vps33b | ENSPNYP00000031391 | ENSPNYP00000004852 | Uncharacterized protein. | VPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family. | 0.984 |
ENSPNYP00000031391 | vps39 | ENSPNYP00000031391 | ENSPNYP00000013527 | Uncharacterized protein. | VPS39 subunit of HOPS complex. | 0.991 |
ENSPNYP00000031391 | vps41 | ENSPNYP00000031391 | ENSPNYP00000002353 | Uncharacterized protein. | Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. | 0.991 |
ENSPNYP00000031391 | vps8 | ENSPNYP00000031391 | ENSPNYP00000011519 | Uncharacterized protein. | VPS8 subunit of CORVET complex. | 0.955 |
LOC102208376 | ENSPNYP00000031391 | ENSPNYP00000021424 | ENSPNYP00000031391 | Si:ch211-266g18.9. | Uncharacterized protein. | 0.968 |
LOC102208376 | vps11 | ENSPNYP00000021424 | ENSPNYP00000002166 | Si:ch211-266g18.9. | Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. | 0.991 |
LOC102208376 | vps16 | ENSPNYP00000021424 | ENSPNYP00000004105 | Si:ch211-266g18.9. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | 0.992 |
LOC102208376 | vps18 | ENSPNYP00000021424 | ENSPNYP00000004121 | Si:ch211-266g18.9. | VPS18 core subunit of CORVET and HOPS complexes. | 0.968 |
LOC102208376 | vps33b | ENSPNYP00000021424 | ENSPNYP00000004852 | Si:ch211-266g18.9. | VPS33B late endosome and lysosome associated; Belongs to the STXBP/unc-18/SEC1 family. | 0.968 |
LOC102208376 | vps39 | ENSPNYP00000021424 | ENSPNYP00000013527 | Si:ch211-266g18.9. | VPS39 subunit of HOPS complex. | 0.949 |
LOC102208376 | vps41 | ENSPNYP00000021424 | ENSPNYP00000002353 | Si:ch211-266g18.9. | Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. | 0.989 |
LOC102208376 | vps8 | ENSPNYP00000021424 | ENSPNYP00000011519 | Si:ch211-266g18.9. | VPS8 subunit of CORVET complex. | 0.935 |
tgfbrap1 | ENSPNYP00000031391 | ENSPNYP00000003131 | ENSPNYP00000031391 | Transforming growth factor, beta receptor associated protein 1. | Uncharacterized protein. | 0.968 |
tgfbrap1 | vps11 | ENSPNYP00000003131 | ENSPNYP00000002166 | Transforming growth factor, beta receptor associated protein 1. | Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. | 0.994 |
tgfbrap1 | vps16 | ENSPNYP00000003131 | ENSPNYP00000004105 | Transforming growth factor, beta receptor associated protein 1. | Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. | 0.995 |
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