Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102201616 | dnlz | ENSPNYP00000020533 | ENSPNYP00000004957 | Tripartite motif containing 35-28. | DNL-type zinc finger. | 0.510 |
LOC102206980-2 | dnlz | ENSPNYP00000001415 | ENSPNYP00000004957 | Presequence translocase associated motor 16. | DNL-type zinc finger. | 0.599 |
LOC102206980-2 | grpel1 | ENSPNYP00000001415 | ENSPNYP00000026449 | Presequence translocase associated motor 16. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.896 |
LOC102206980-2 | hspa9 | ENSPNYP00000001415 | ENSPNYP00000018771 | Presequence translocase associated motor 16. | Heat shock protein 9; Belongs to the heat shock protein 70 family. | 0.854 |
LOC102206980-2 | timm13 | ENSPNYP00000001415 | ENSPNYP00000009530 | Presequence translocase associated motor 16. | Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family. | 0.593 |
LOC102206980-2 | timm50 | ENSPNYP00000001415 | ENSPNYP00000010619 | Presequence translocase associated motor 16. | Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | 0.964 |
cdpf1 | dnlz | ENSPNYP00000008657 | ENSPNYP00000004957 | C6_DPF domain-containing protein. | DNL-type zinc finger. | 0.543 |
coq4 | dnlz | ENSPNYP00000012784 | ENSPNYP00000004957 | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family. | DNL-type zinc finger. | 0.461 |
coq4 | suox | ENSPNYP00000012784 | ENSPNYP00000026888 | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family. | Sulfite oxidase. | 0.597 |
dnlz | LOC102201616 | ENSPNYP00000004957 | ENSPNYP00000020533 | DNL-type zinc finger. | Tripartite motif containing 35-28. | 0.510 |
dnlz | LOC102206980-2 | ENSPNYP00000004957 | ENSPNYP00000001415 | DNL-type zinc finger. | Presequence translocase associated motor 16. | 0.599 |
dnlz | cdpf1 | ENSPNYP00000004957 | ENSPNYP00000008657 | DNL-type zinc finger. | C6_DPF domain-containing protein. | 0.543 |
dnlz | coq4 | ENSPNYP00000004957 | ENSPNYP00000012784 | DNL-type zinc finger. | Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family. | 0.461 |
dnlz | grpel1 | ENSPNYP00000004957 | ENSPNYP00000026449 | DNL-type zinc finger. | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | 0.563 |
dnlz | hspa9 | ENSPNYP00000004957 | ENSPNYP00000018771 | DNL-type zinc finger. | Heat shock protein 9; Belongs to the heat shock protein 70 family. | 0.936 |
dnlz | pign | ENSPNYP00000004957 | ENSPNYP00000029513 | DNL-type zinc finger. | Phosphatidylinositol glycan anchor biosynthesis, class N. | 0.527 |
dnlz | suox | ENSPNYP00000004957 | ENSPNYP00000026888 | DNL-type zinc finger. | Sulfite oxidase. | 0.454 |
dnlz | timm13 | ENSPNYP00000004957 | ENSPNYP00000009530 | DNL-type zinc finger. | Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family. | 0.540 |
dnlz | timm50 | ENSPNYP00000004957 | ENSPNYP00000010619 | DNL-type zinc finger. | Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. | 0.475 |
grpel1 | LOC102206980-2 | ENSPNYP00000026449 | ENSPNYP00000001415 | GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family. | Presequence translocase associated motor 16. | 0.896 |
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