STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102210571E1A binding protein p300 a. (2779 aa)    
Predicted Functional Partners:
ENSPNYP00000008816
Tumor protein p53.
    
 0.991
crebbp
CREB binding protein a.
  
0.987
LOC102214169
CREB binding protein b.
  
0.986
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 
 0.985
sp1
Sp1 transcription factor.
   
 0.985
LOC102204062
Interferon regulatory factor 3.
    
 0.982
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.981
LOC102201886
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.950
kat2a
Histone acetyltransferase; Belongs to the acetyltransferase family. GCN5 subfamily.
    
 0.950
maml1
Mastermind-like transcriptional coactivator 1.
   
 0.941
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.