STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102196729Si:dkey-192p21.6. (474 aa)    
Predicted Functional Partners:
naglu
N-acetylglucosaminidase, alpha.
     
 0.906
sgsh
N-sulfoglucosamine sulfohydrolase (sulfamidase).
     
 0.888
hgsnat
Heparan-alpha-glucosaminide N-acetyltransferase.
  
  
 
0.815
LOC102198347
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
   
 
 0.654
gns
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
   
 
 0.654
arsg
Arylsulfatase G.
     
 0.646
galns
Galactosamine (N-acetyl)-6-sulfatase.
     
 0.599
arsk
Arylsulfatase family, member K.
   
 
 0.586
ids
Iduronate 2-sulfatase.
     
 0.584
sulf1
Sulfatase 1.
   
 
 0.556
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.