STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdan1Codanin 1. (1032 aa)    
Predicted Functional Partners:
asf1b
Anti-silencing function 1Ba histone chaperone.
    
 
 0.742
LOC102210765
Anti-silencing function 1Ba histone chaperone.
    
 
 0.742
PRDM15
PR/SET domain 15.
   
    0.638
ENSPNYP00000031928
C2H2-type domain-containing protein.
   
    0.638
ENSPNYP00000022230
Zgc:154061.
    
 
 0.622
ipo4
Importin 4.
    
 
 0.545
wdfy3
WD repeat and FYVE domain containing 3.
      
 0.533
zwilch
Zwilch kinetochore protein.
      
 0.533
ENSPNYP00000008983
Uncharacterized protein.
    
 
 0.481
LOC102207416
Interleukin 13 receptor, alpha 2.
      
 0.442
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.