STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNYP00000007458Uncharacterized protein. (458 aa)    
Predicted Functional Partners:
LOC102199979
Glycoprotein IX (platelet).
   
 0.894
gp1bb
Glycoprotein Ib platelet subunit beta.
   
 
 0.856
ENSPNYP00000018997
Uncharacterized protein.
    
  0.831
ENSPNYP00000008811
Vav 3 guanine nucleotide exchange factor b.
    
 0.753
ntng1
Netrin g1a.
    
 0.753
cpn1
Carboxypeptidase N, polypeptide 1.
    
 0.729
otogl
Otogelin-like.
    
 0.724
vwf
Von Willebrand factor.
    
 0.724
otog
Otogelin.
    
 0.724
ENSPNYP00000027984
Subcommissural organ spondin.
    
 0.724
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.