STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnase1l1Deoxyribonuclease; Belongs to the DNase I family. (291 aa)    
Predicted Functional Partners:
sin3b
SIN3 transcription regulator family member B.
    
 0.732
sin3a
SIN3 transcription regulator family member Aa.
    
 0.732
LOC102215769
SIN3 transcription regulator family member Ab.
    
 0.732
ikbkb
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.684
LOC102198636
TANK-binding kinase 1.
    
 0.684
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.684
LOC102195172
Protein kinase domain-containing protein.
    
 0.684
LOC102195226
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.684
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.674
optn
Optineurin.
   
 0.674
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.