STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102192929Uncharacterized protein; Belongs to the CD36 family. (520 aa)    
Predicted Functional Partners:
cd63
Tetraspanin.
     
 0.867
ENSPNYP00000025982
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
     
 0.850
LOC102204117
Scavenger receptor class B, member 2c; Belongs to the CD36 family.
  
  
 
0.825
LOC102197740
Scavenger receptor class B, member 2a; Belongs to the CD36 family.
  
  
 
0.823
ENSPNYP00000021655
Tetraspanin.
   
 
 0.743
LOC102196927
Uncharacterized protein.
   
 
  0.699
LOC102194850
Uncharacterized protein.
    
 0.666
LOC102195121
Uncharacterized protein.
    
 0.666
VAMP3
Vesicle associated membrane protein 3.
   
  0.658
LOC102198411
TIR domain-containing protein.
   
 0.657
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.