STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ackr4Atypical chemokine receptor 4b; Belongs to the G-protein coupled receptor 1 family. (368 aa)    
Predicted Functional Partners:
LOC102207587
SCY domain-containing protein.
   
 0.935
LOC102193879
Chemokine (C-C motif) ligand 25b.
    
 0.903
ENSPNYP00000016437
SCY domain-containing protein.
    
 0.901
LOC102210705
Atypical chemokine receptor 4a; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.853
CXCL8
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.674
ENSPNYP00000018997
Uncharacterized protein.
   
  0.654
LOC102199463
SCY domain-containing protein.
  
 0.645
LOC102200177
SCY domain-containing protein.
   
 0.588
ENSPNYP00000004161
SCY domain-containing protein.
   
 0.553
ENSPNYP00000004204
SCY domain-containing protein.
   
 0.553
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.