STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dennd2aUDENN domain-containing protein. (961 aa)    
Predicted Functional Partners:
rab35
RAB35, member RAS oncogene family b.
    
 0.785
ift27
Intraflagellar transport 27.
    
 0.785
LOC102206392
Si:dkey-16l2.16.
    
 0.785
LOC102212685
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 
  0.616
suox
Sulfite oxidase.
      
 0.543
ENSPNYP00000018481
Uncharacterized protein.
    
 
 0.435
ENSPNYP00000018534
Uncharacterized protein.
    
 
 0.435
ENSPNYP00000022803
Uncharacterized protein.
    
 
 0.435
ENSPNYP00000022967
Uncharacterized protein.
    
 
 0.435
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.