Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPNYP00000009323 | ENSPNYP00000009343 | ENSPNYP00000009323 | ENSPNYP00000009343 | Hect domain and RLD 7. | Uncharacterized protein. | 0.776 |
ENSPNYP00000009323 | ENSPNYP00000009406 | ENSPNYP00000009323 | ENSPNYP00000009406 | Hect domain and RLD 7. | B30.2/SPRY domain-containing protein. | 0.916 |
ENSPNYP00000009323 | ENSPNYP00000009429 | ENSPNYP00000009323 | ENSPNYP00000009429 | Hect domain and RLD 7. | HECT domain-containing protein. | 0.643 |
ENSPNYP00000009323 | LOC102208879 | ENSPNYP00000009323 | ENSPNYP00000017824 | Hect domain and RLD 7. | Recombination signal binding protein for immunoglobulin kappa J region-like. | 0.620 |
ENSPNYP00000009323 | UBE3A | ENSPNYP00000009323 | ENSPNYP00000029463 | Hect domain and RLD 7. | Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. | 0.672 |
ENSPNYP00000009323 | bard1 | ENSPNYP00000009323 | ENSPNYP00000025440 | Hect domain and RLD 7. | BRCA1 associated RING domain 1. | 0.621 |
ENSPNYP00000009323 | pias4 | ENSPNYP00000009323 | ENSPNYP00000022513 | Hect domain and RLD 7. | Protein inhibitor of activated STAT, 4a. | 0.662 |
ENSPNYP00000009323 | ranbp2 | ENSPNYP00000009323 | ENSPNYP00000021131 | Hect domain and RLD 7. | RAN binding protein 2. | 0.733 |
ENSPNYP00000009323 | rnf8 | ENSPNYP00000009323 | ENSPNYP00000030872 | Hect domain and RLD 7. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.791 |
ENSPNYP00000009323 | rps27a | ENSPNYP00000009323 | ENSPNYP00000026531 | Hect domain and RLD 7. | Ribosomal protein S27a. | 0.643 |
ENSPNYP00000009343 | ENSPNYP00000009323 | ENSPNYP00000009343 | ENSPNYP00000009323 | Uncharacterized protein. | Hect domain and RLD 7. | 0.776 |
ENSPNYP00000009343 | ENSPNYP00000009406 | ENSPNYP00000009343 | ENSPNYP00000009406 | Uncharacterized protein. | B30.2/SPRY domain-containing protein. | 0.899 |
ENSPNYP00000009343 | ENSPNYP00000009429 | ENSPNYP00000009343 | ENSPNYP00000009429 | Uncharacterized protein. | HECT domain-containing protein. | 0.900 |
ENSPNYP00000009343 | LOC102208879 | ENSPNYP00000009343 | ENSPNYP00000017824 | Uncharacterized protein. | Recombination signal binding protein for immunoglobulin kappa J region-like. | 0.620 |
ENSPNYP00000009343 | UBE3A | ENSPNYP00000009343 | ENSPNYP00000029463 | Uncharacterized protein. | Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. | 0.672 |
ENSPNYP00000009343 | bard1 | ENSPNYP00000009343 | ENSPNYP00000025440 | Uncharacterized protein. | BRCA1 associated RING domain 1. | 0.621 |
ENSPNYP00000009343 | pias4 | ENSPNYP00000009343 | ENSPNYP00000022513 | Uncharacterized protein. | Protein inhibitor of activated STAT, 4a. | 0.662 |
ENSPNYP00000009343 | ranbp2 | ENSPNYP00000009343 | ENSPNYP00000021131 | Uncharacterized protein. | RAN binding protein 2. | 0.733 |
ENSPNYP00000009343 | rnf8 | ENSPNYP00000009343 | ENSPNYP00000030872 | Uncharacterized protein. | E3 ubiquitin-protein ligase RNF8; E3 ubiquitin-protein ligase that plays a key role in DNA damage signaling via 2 distinct roles: by mediating the 'Lys-63'-linked ubiquitination of histones H2A and H2AX and promoting the recruitment of DNA repair proteins at double-strand breaks (DSBs) sites, and by catalyzing 'Lys-48'-linked ubiquitination to remove target proteins from DNA damage sites. Following DNA DSBs, it is recruited to the sites of damage by ATM-phosphorylated MDC1 and catalyzes the 'Lys-63'-linked ubiquitination of histones H2A and H2AX, thereby promoting the formation of TP53 [...] | 0.791 |
ENSPNYP00000009343 | rps27a | ENSPNYP00000009343 | ENSPNYP00000026531 | Uncharacterized protein. | Ribosomal protein S27a. | 0.643 |
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