STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102210720AH domain-containing protein. (330 aa)    
Predicted Functional Partners:
ENSPNYP00000001218
Zgc:171459.
    
 0.861
ENSPNYP00000001226
Uncharacterized protein.
    
 0.861
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.861
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.634
ENSPNYP00000030492
Uncharacterized protein.
    
 0.634
arl15
ADP-ribosylation factor-like 15a.
    
 0.588
rab2a
RAB2A, member RAS oncogene family.
   
 0.541
dnajc27
DnaJ (Hsp40) homolog, subfamily C, member 27.
   
 0.496
ENSPNYP00000000316
Ras homolog gene family, member Gd.
   
  0.489
LOC102201274
Uncharacterized protein.
   
  0.489
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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