Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102199243 | park7 | ENSPNYP00000029059 | ENSPNYP00000024482 | BH4_2 domain-containing protein. | Parkinson protein 7. | 0.593 |
LOC102199243 | sod3 | ENSPNYP00000029059 | ENSPNYP00000010638 | BH4_2 domain-containing protein. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.874 |
LOC102199243 | vdac1 | ENSPNYP00000029059 | ENSPNYP00000016744 | BH4_2 domain-containing protein. | Voltage-dependent anion channel 1. | 0.425 |
LOC102208952 | sod2 | ENSPNYP00000022404 | ENSPNYP00000029654 | Heme-binding protein soul4. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.483 |
LOC102208952 | sod3 | ENSPNYP00000022404 | ENSPNYP00000010638 | Heme-binding protein soul4. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.915 |
LOC102215154 | park7 | ENSPNYP00000011259 | ENSPNYP00000024482 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Parkinson protein 7. | 0.973 |
LOC102215154 | sod2 | ENSPNYP00000011259 | ENSPNYP00000029654 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.956 |
LOC102215154 | sod3 | ENSPNYP00000011259 | ENSPNYP00000010638 | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.951 |
bcl2 | park7 | ENSPNYP00000016323 | ENSPNYP00000024482 | BCL2 apoptosis regulator b. | Parkinson protein 7. | 0.593 |
bcl2 | sod3 | ENSPNYP00000016323 | ENSPNYP00000010638 | BCL2 apoptosis regulator b. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.874 |
bcl2 | vdac1 | ENSPNYP00000016323 | ENSPNYP00000016744 | BCL2 apoptosis regulator b. | Voltage-dependent anion channel 1. | 0.425 |
ccs | sod2 | ENSPNYP00000031313 | ENSPNYP00000029654 | Copper chaperone for superoxide dismutase. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.937 |
ccs | sod3 | ENSPNYP00000031313 | ENSPNYP00000010638 | Copper chaperone for superoxide dismutase. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.993 |
park7 | LOC102199243 | ENSPNYP00000024482 | ENSPNYP00000029059 | Parkinson protein 7. | BH4_2 domain-containing protein. | 0.593 |
park7 | LOC102215154 | ENSPNYP00000024482 | ENSPNYP00000011259 | Parkinson protein 7. | Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. | 0.973 |
park7 | bcl2 | ENSPNYP00000024482 | ENSPNYP00000016323 | Parkinson protein 7. | BCL2 apoptosis regulator b. | 0.593 |
park7 | sod2 | ENSPNYP00000024482 | ENSPNYP00000029654 | Parkinson protein 7. | Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.935 |
park7 | sod3 | ENSPNYP00000024482 | ENSPNYP00000010638 | Parkinson protein 7. | Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.978 |
park7 | vdac1 | ENSPNYP00000024482 | ENSPNYP00000016744 | Parkinson protein 7. | Voltage-dependent anion channel 1. | 0.682 |
psmd14 | psmd2 | ENSPNYP00000000777 | ENSPNYP00000014496 | Proteasome 26S subunit, non-ATPase 14. | 26S proteasome non-ATPase regulatory subunit 2; Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair; Belongs to the proteasome subunit S2 family. | 0.999 |
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