STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
shisa3Shisa family member 3. (285 aa)    
Predicted Functional Partners:
vopp1
VOPP1 WW domain binding protein.
      
 0.572
RGS22
Regulator of G protein signaling 22.
      
 0.538
eepd1
Endonuclease/exonuclease/phosphatase family domain containing 1.
      
 0.506
LOC102210167
WW domain binding protein 1.
      
 0.499
ENSPNYP00000008272
Uncharacterized protein.
      
 0.459
plekhh2
Pleckstrin homology domain containing, family H (with MyTH4 domain) member 2.
      
 0.444
tmem33
Transmembrane protein 33.
      
 0.431
SYNDIG1
Synapse differentiation inducing 1.
      
 0.424
shisal1
Shisa like 1b.
      
 0.414
BEND4
BEN domain containing 4.
      
 0.407
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.