STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNYP00000011724Uncharacterized protein. (225 aa)    
Predicted Functional Partners:
LOC102198636
TANK-binding kinase 1.
   
 0.904
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.904
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
   
 0.887
optn
Optineurin.
   
 0.870
tradd
Tnfrsf1a-associated via death domain.
     
 0.868
tbkbp1
TBK1 binding protein 1.
     
 0.866
LOC102206926
Tumor necrosis factor b (TNF superfamily, member 2).
    
 
 0.860
azi2
5-azacytidine induced 2.
   
 
 0.850
ENSPNYP00000003728
Uncharacterized protein.
     
 0.810
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.755
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.