STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102202662Uncharacterized protein. (396 aa)    
Predicted Functional Partners:
il6st
Uncharacterized protein.
    
 0.934
csf3r
Colony stimulating factor 3 receptor (granulocyte).
  
 0.934
LOC102205339
Uncharacterized protein.
    
 0.930
LOC102215120
Uncharacterized protein.
   
 0.921
LOC102210723
Interleukin 11a.
     
 0.907
il10
Interleukin 10.
     
 0.846
LOC102213831
Uncharacterized protein.
     
 0.835
ENSPNYP00000006623
AIG1-type G domain-containing protein.
   
 0.819
ENSPNYP00000014421
Septin-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
   
 0.819
ENSPNYP00000014562
AAA domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
   
 0.819
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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