STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwf19l1CWF19 like cell cycle control factor 1. (553 aa)    
Predicted Functional Partners:
dbr1
Debranching RNA lariats 1.
   
 
0.857
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
    
   0.659
prpf19
Pre-mRNA processing factor 19.
   
 
 0.623
syf2
SYF2 pre-mRNA-splicing factor.
    
   0.614
LOC102200440
Uncharacterized protein.
    
   0.510
LOC102196245
Uncharacterized protein.
    
   0.510
lrmda
Leucine rich melanocyte differentiation associated.
    
   0.510
LOC102204925
Leucine rich repeat containing 51.
    
   0.510
bud31
BUD31 homolog.
    
 
 0.507
xab2
XPA binding protein 2.
    
 
 0.506
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.