STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNYP00000013925Acidic (leucine-rich) nuclear phosphoprotein 32 family, member B. (245 aa)    
Predicted Functional Partners:
set
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.782
LOC102199531
SET nuclear proto-oncogene b; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.782
LOC102205886
Histone H2A; Belongs to the histone H2A family.
   
 
 0.755
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
 
 0.755
LOC102205153
Testis specific protein Y-linked; Belongs to the nucleosome assembly protein (NAP) family.
   
 0.718
LOC102192710
CRM1_C domain-containing protein.
   
 0.694
xpo1
Exportin 1 (CRM1 homolog, yeast) a.
   
 0.694
elavl1
ELAV-like protein; Belongs to the RRM elav family.
   
 0.555
LOC102197945
ELAV-like protein; Belongs to the RRM elav family.
   
 0.555
LOC102216135
Radial spoke head component 4A.
   
 0.542
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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