Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC102195817 | LOC102213816 | ENSPNYP00000029057 | ENSPNYP00000007117 | Hypoxia inducible factor 1 subunit alpha, like. | Uncharacterized protein. | 0.683 |
LOC102195817 | epas1 | ENSPNYP00000029057 | ENSPNYP00000015532 | Hypoxia inducible factor 1 subunit alpha, like. | Endothelial PAS domain protein 1b. | 0.686 |
LOC102195817 | hif1a | ENSPNYP00000029057 | ENSPNYP00000029067 | Hypoxia inducible factor 1 subunit alpha, like. | Hypoxia inducible factor 1 subunit alpha a. | 0.853 |
LOC102195817 | tyw5 | ENSPNYP00000029057 | ENSPNYP00000014776 | Hypoxia inducible factor 1 subunit alpha, like. | tRNA-yW synthesizing protein 5. | 0.681 |
LOC102213816 | LOC102195817 | ENSPNYP00000007117 | ENSPNYP00000029057 | Uncharacterized protein. | Hypoxia inducible factor 1 subunit alpha, like. | 0.683 |
LOC102213816 | tyw5 | ENSPNYP00000007117 | ENSPNYP00000014776 | Uncharacterized protein. | tRNA-yW synthesizing protein 5. | 0.681 |
NPAS3 | tyw5 | ENSPNYP00000019055 | ENSPNYP00000014776 | Neuronal PAS domain protein 3. | tRNA-yW synthesizing protein 5. | 0.681 |
epas1 | LOC102195817 | ENSPNYP00000015532 | ENSPNYP00000029057 | Endothelial PAS domain protein 1b. | Hypoxia inducible factor 1 subunit alpha, like. | 0.686 |
epas1 | tyw5 | ENSPNYP00000015532 | ENSPNYP00000014776 | Endothelial PAS domain protein 1b. | tRNA-yW synthesizing protein 5. | 0.681 |
hif1a | LOC102195817 | ENSPNYP00000029067 | ENSPNYP00000029057 | Hypoxia inducible factor 1 subunit alpha a. | Hypoxia inducible factor 1 subunit alpha, like. | 0.853 |
hif1a | tyw5 | ENSPNYP00000029067 | ENSPNYP00000014776 | Hypoxia inducible factor 1 subunit alpha a. | tRNA-yW synthesizing protein 5. | 0.681 |
npas1 | tyw5 | ENSPNYP00000024926 | ENSPNYP00000014776 | Neuronal PAS domain protein 1. | tRNA-yW synthesizing protein 5. | 0.681 |
rps6 | tyw5 | ENSPNYP00000010248 | ENSPNYP00000014776 | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | tRNA-yW synthesizing protein 5. | 0.589 |
trmt12 | tyw3 | ENSPNYP00000014091 | ENSPNYP00000023815 | tRNA methyltransferase 12 homolog. | tRNA-yW synthesizing protein 3 homolog (S. cerevisiae). | 0.783 |
trmt12 | tyw5 | ENSPNYP00000014091 | ENSPNYP00000014776 | tRNA methyltransferase 12 homolog. | tRNA-yW synthesizing protein 5. | 0.608 |
trpa1 | tyw5 | ENSPNYP00000001976 | ENSPNYP00000014776 | Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family. | tRNA-yW synthesizing protein 5. | 0.589 |
tyw3 | trmt12 | ENSPNYP00000023815 | ENSPNYP00000014091 | tRNA-yW synthesizing protein 3 homolog (S. cerevisiae). | tRNA methyltransferase 12 homolog. | 0.783 |
tyw3 | tyw5 | ENSPNYP00000023815 | ENSPNYP00000014776 | tRNA-yW synthesizing protein 3 homolog (S. cerevisiae). | tRNA-yW synthesizing protein 5. | 0.582 |
tyw5 | LOC102195817 | ENSPNYP00000014776 | ENSPNYP00000029057 | tRNA-yW synthesizing protein 5. | Hypoxia inducible factor 1 subunit alpha, like. | 0.681 |
tyw5 | LOC102213816 | ENSPNYP00000014776 | ENSPNYP00000007117 | tRNA-yW synthesizing protein 5. | Uncharacterized protein. | 0.681 |
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