STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNYP00000014934Uncharacterized protein. (154 aa)    
Predicted Functional Partners:
LOC102196105
Uncharacterized protein.
    
 0.458
rictor
RPTOR independent companion of MTOR, complex 2 a.
   
 
  0.448
LOC102195747
Cell division cycle 42.
    
  0.429
CDC42
Cell division cycle 42.
    
  0.429
LOC102201274
Uncharacterized protein.
    
  0.413
LOC102201940
Uncharacterized protein.
    
  0.413
LOC102195686
Uncharacterized protein.
    
  0.413
LOC102196958
Uncharacterized protein.
    
  0.411
LOC102210795
Ras homolog family member Cb.
    
  0.411
rnd3
Rho family GTPase 3a.
    
  0.411
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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