STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102192878Uncharacterized protein. (694 aa)    
Predicted Functional Partners:
arnt2
Aryl-hydrocarbon receptor nuclear translocator 2.
   
0.852
LOC102211961
Aryl hydrocarbon receptor nuclear translocator.
   
0.852
ENSPNYP00000015744
Aryl hydrocarbon receptor interacting protein like 2.
    
 0.839
aipl1
Aryl hydrocarbon receptor interacting protein-like 1.
    
 0.839
aip
Peptidylprolyl isomerase.
    
 0.839
ncoa2
Nuclear receptor coactivator 2.
   
0.754
LOC102209857
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
0.754
CLOCK
Clock circadian regulator a.
   
0.754
LOC102205918
Nuclear receptor coactivator.
   
0.754
LOC102212436
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
0.754
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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