STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNYP00000016873RING-type domain-containing protein. (743 aa)    
Predicted Functional Partners:
sumo1
Small ubiquitin-related modifier.
    
 0.797
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.791
LOC102212740
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.791
ENSPNYP00000000447
Uncharacterized protein.
    
 0.777
ENSPNYP00000008816
Tumor protein p53.
    
 
 0.751
LOC102207357
Small ubiquitin-related modifier.
    
 0.702
LOC102203776
Small ubiquitin-related modifier.
    
 0.702
LOC102212432
Small ubiquitin-related modifier.
    
 0.702
ENSPNYP00000016413
Rad60-SLD domain-containing protein.
    
 0.677
ENSPNYP00000019396
Rad60-SLD domain-containing protein.
    
 0.677
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.