STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn23Protein tyrosine phosphatase, non-receptor type 23, a. (1905 aa)    
Predicted Functional Partners:
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
    
 0.988
ENSPNYP00000000754
Uncharacterized protein.
    
 0.986
LOC102203309
Charged multivesicular body protein 4Bb.
    
 0.986
CHMP4B
Charged multivesicular body protein 4B.
    
 0.986
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.964
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.934
grb2
Growth factor receptor-bound protein 2b.
   
 0.900
LOC102200506
Uncharacterized protein.
   
 0.895
LOC102201843
GRB2 related adaptor protein 2a.
   
 0.895
LOC102197068
GRB2 related adaptor protein 2b.
   
 0.895
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.