Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
COX5A | ENSPNYP00000017452 | ENSPNYP00000028881 | ENSPNYP00000017452 | Cytochrome c oxidase subunit 5A. | CCAAT/enhancer binding protein (C/EBP) 1. | 0.799 |
COX5A | LOC102201652 | ENSPNYP00000028881 | ENSPNYP00000026988 | Cytochrome c oxidase subunit 5A. | Cytochrome c oxidase subunit 7C. | 0.999 |
COX5A | LOC102214855 | ENSPNYP00000028881 | ENSPNYP00000012546 | Cytochrome c oxidase subunit 5A. | Cytochrome c oxidase subunit 5Ab. | 0.881 |
ENSPNYP00000013839 | ENSPNYP00000017452 | ENSPNYP00000013839 | ENSPNYP00000017452 | Runt domain-containing protein. | CCAAT/enhancer binding protein (C/EBP) 1. | 0.761 |
ENSPNYP00000013839 | LOC102192018 | ENSPNYP00000013839 | ENSPNYP00000027330 | Runt domain-containing protein. | Runt-related transcription factor. | 0.817 |
ENSPNYP00000013839 | cbfa2t3 | ENSPNYP00000013839 | ENSPNYP00000006287 | Runt domain-containing protein. | CBFA2/RUNX1 partner transcriptional co-repressor 3. | 0.668 |
ENSPNYP00000013839 | pdgfra | ENSPNYP00000013839 | ENSPNYP00000014724 | Runt domain-containing protein. | Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.492 |
ENSPNYP00000013839 | runx1t1 | ENSPNYP00000013839 | ENSPNYP00000014040 | Runt domain-containing protein. | RUNX1 partner transcriptional co-repressor 1. | 0.668 |
ENSPNYP00000013839 | runx2 | ENSPNYP00000013839 | ENSPNYP00000030072 | Runt domain-containing protein. | Runt-related transcription factor. | 0.596 |
ENSPNYP00000013839 | runx3 | ENSPNYP00000013839 | ENSPNYP00000006512 | Runt domain-containing protein. | Runt-related transcription factor. | 0.607 |
ENSPNYP00000017452 | COX5A | ENSPNYP00000017452 | ENSPNYP00000028881 | CCAAT/enhancer binding protein (C/EBP) 1. | Cytochrome c oxidase subunit 5A. | 0.799 |
ENSPNYP00000017452 | ENSPNYP00000013839 | ENSPNYP00000017452 | ENSPNYP00000013839 | CCAAT/enhancer binding protein (C/EBP) 1. | Runt domain-containing protein. | 0.761 |
ENSPNYP00000017452 | LOC102192018 | ENSPNYP00000017452 | ENSPNYP00000027330 | CCAAT/enhancer binding protein (C/EBP) 1. | Runt-related transcription factor. | 0.792 |
ENSPNYP00000017452 | LOC102201652 | ENSPNYP00000017452 | ENSPNYP00000026988 | CCAAT/enhancer binding protein (C/EBP) 1. | Cytochrome c oxidase subunit 7C. | 0.777 |
ENSPNYP00000017452 | LOC102214855 | ENSPNYP00000017452 | ENSPNYP00000012546 | CCAAT/enhancer binding protein (C/EBP) 1. | Cytochrome c oxidase subunit 5Ab. | 0.799 |
ENSPNYP00000017452 | cbfa2t3 | ENSPNYP00000017452 | ENSPNYP00000006287 | CCAAT/enhancer binding protein (C/EBP) 1. | CBFA2/RUNX1 partner transcriptional co-repressor 3. | 0.826 |
ENSPNYP00000017452 | pdgfra | ENSPNYP00000017452 | ENSPNYP00000014724 | CCAAT/enhancer binding protein (C/EBP) 1. | Platelet-derived growth factor receptor, alpha polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.852 |
ENSPNYP00000017452 | runx1t1 | ENSPNYP00000017452 | ENSPNYP00000014040 | CCAAT/enhancer binding protein (C/EBP) 1. | RUNX1 partner transcriptional co-repressor 1. | 0.826 |
ENSPNYP00000017452 | runx2 | ENSPNYP00000017452 | ENSPNYP00000030072 | CCAAT/enhancer binding protein (C/EBP) 1. | Runt-related transcription factor. | 0.791 |
ENSPNYP00000017452 | runx3 | ENSPNYP00000017452 | ENSPNYP00000006512 | CCAAT/enhancer binding protein (C/EBP) 1. | Runt-related transcription factor. | 0.791 |
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