STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klhdc3Kelch domain containing 3. (382 aa)    
Predicted Functional Partners:
cul2
Cullin 2; Belongs to the cullin family.
    
 
 0.821
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
   0.775
LOC102201015
Elongin B.
    
 
 0.711
LOC102193050
Ubiquitin-like domain-containing protein.
    
 
 0.711
ubxn7
UBX domain protein 7.
    
   0.684
mea1
Male-enhanced antigen 1.
      
 0.568
spata4
Spermatogenesis associated 4.
      
 0.538
sfi1
SFI1 centrin binding protein.
      
 0.511
zmynd10
Zinc finger, MYND-type containing 10.
      
 0.504
ENSPNYP00000017764
Uncharacterized protein.
      
 0.459
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.