STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102208044G_PROTEIN_RECEP_F3_4 domain-containing protein. (836 aa)    
Predicted Functional Partners:
ENSPNYP00000018997
Uncharacterized protein.
    
  0.854
wdr90
WD repeat domain 90.
    
   0.650
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.552
LOC102212032
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
 0.547
ENSPNYP00000001348
NDK domain-containing protein.
    
   0.493
HOMER1
Homer scaffold protein 1.
    
  0.481
homer2
Homer scaffold protein 2.
    
  0.481
LOC102194778
WH1 domain-containing protein.
    
  0.477
homer3
Homer scaffold protein 3b.
    
  0.477
pacrg
PARK2 co-regulated.
   
 
 0.477
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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