STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102199004Extended synaptotagmin-like protein 3. (770 aa)    
Predicted Functional Partners:
ENSPNYP00000018997
Uncharacterized protein.
   
 
 0.856
itsn1
Intersectin 1 (SH3 domain protein).
    
 
0.657
ENSPNYP00000018481
Uncharacterized protein.
    
  0.657
ENSPNYP00000018534
Uncharacterized protein.
    
 
0.657
ENSPNYP00000022803
Uncharacterized protein.
    
  0.657
ENSPNYP00000022967
Uncharacterized protein.
    
  0.657
LOC102192340
Growth arrest specific 7.
    
 0.605
LOC102197773
Growth arrest-specific 7a.
    
 0.605
ENSPNYP00000000316
Ras homolog gene family, member Gd.
    
  0.571
LOC102196166
Ras homolog family member F.
    
  0.549
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.