STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpm3Transient receptor potential cation channel, subfamily M, member 3. (1560 aa)    
Predicted Functional Partners:
ppp1cc
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.610
LOC102204832
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.610
ppp1cb
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.610
LOC102215132
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.610
LOC102208922
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.610
ENSPNYP00000031050
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.610
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.610
nudt9
Nudix (nucleoside diphosphate linked moiety X)-type motif 9.
 
   
 0.580
trpv4
Transient receptor potential cation channel, subfamily V, member 4; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.563
ENSPNYP00000006980
ANK_REP_REGION domain-containing protein.
   
 
 0.560
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.