STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNYP00000019516Uncharacterized protein. (89 aa)    
Predicted Functional Partners:
TMEM19
Transmembrane protein 19.
    
   0.637
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
   0.541
aasdh
Aminoadipate-semialdehyde dehydrogenase.
      
 0.507
faxdc2
Fatty acid hydroxylase domain containing 2; Belongs to the sterol desaturase family.
    
 
 0.452
tmem159
Uncharacterized protein.
      
 0.420
LOC102209294
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
      
 0.407
srxn1
Sulfiredoxin.
      
 0.403
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.