STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atg9aAutophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (842 aa)    
Predicted Functional Partners:
ulk1
Unc-51 like autophagy activating kinase 1.
   
 0.963
LOC102195676
Unc-51 like autophagy activating kinase 1a.
   
 0.963
ulk2
Unc-51 like autophagy activating kinase 2.
   
 0.963
wipi2
WD repeat domain, phosphoinositide interacting 2.
   
 0.956
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.956
atg2a
Autophagy related 2A.
   
 0.946
ATG2B
Autophagy related 2B.
   
 0.946
atg13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
   
 0.941
supt20h
SPT20 homolog, SAGA complex component.
    
 0.936
ulk3
Unc-51 like kinase 3; Belongs to the protein kinase superfamily.
   
 0.914
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.