STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102207084Zgc:162730. (406 aa)    
Predicted Functional Partners:
exosc8
Exosome component 8.
    
  0.892
LOC102215852
MAPK activated protein kinase 2a; Belongs to the protein kinase superfamily.
    
 0.882
xrn1
5'-3' exoribonuclease 1.
    
 0.871
LOC102206797
Zgc:114130.
  
  
 
0.826
ENSPNYP00000009255
Decapping mRNA 2.
   
 0.787
cnot1
CCR4-NOT transcription complex, subunit 1.
    
 
 0.773
MAPKAPK3
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.743
LOC102199310
MAPK activated protein kinase 3; Belongs to the protein kinase superfamily.
    
 0.743
ENSPNYP00000012508
Uncharacterized protein.
    
 0.737
dcp1b
Decapping mRNA 1B.
    
 0.728
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.