STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
syt3Synaptotagmin III. (553 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
0.692
ENSPNYP00000018481
Uncharacterized protein.
     
 0.671
ENSPNYP00000018534
Uncharacterized protein.
     
 0.671
ENSPNYP00000022803
Uncharacterized protein.
     
 0.671
ENSPNYP00000022967
Uncharacterized protein.
     
 0.671
snap47
Synaptosome associated protein 47.
   
 0.603
itsn1
Intersectin 1 (SH3 domain protein).
     
 0.531
vamp4
Vesicle-associated membrane protein 4.
    
 0.507
VAMP3
Vesicle associated membrane protein 3.
    
 0.501
LOC102214392
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.493
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.