STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102203030Uncharacterized protein. (471 aa)    
Predicted Functional Partners:
ENSPNYP00000008816
Tumor protein p53.
    
 0.675
ENSPNYP00000018997
Uncharacterized protein.
    
  0.664
bard1
BRCA1 associated RING domain 1.
    
  0.603
ENSPNYP00000013403
Uncharacterized protein.
    
  0.601
ENSPNYP00000013555
Uncharacterized protein.
    
  0.601
YTHDC2
YTH domain containing 2.
    
  0.559
sgk3
Serum/glucocorticoid regulated kinase family member 3; Belongs to the protein kinase superfamily.
    
  0.552
ENSPNYP00000001348
NDK domain-containing protein.
    
 0.526
ripk4
Receptor-interacting serine-threonine kinase 4.
    
  0.515
LOC102204675
Cytochrome b5 reductase 4.
    
  0.512
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.