Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSPNYP00000019921 | ENSPNYP00000019946 | ENSPNYP00000019921 | ENSPNYP00000019946 | Sema domain-containing protein. | Protein kinase domain-containing protein. | 0.909 |
ENSPNYP00000019921 | LOC102210486 | ENSPNYP00000019921 | ENSPNYP00000021299 | Sema domain-containing protein. | NGF domain-containing protein; Belongs to the NGF-beta family. | 0.881 |
ENSPNYP00000019921 | LOC102212172 | ENSPNYP00000019921 | ENSPNYP00000007753 | Sema domain-containing protein. | Tyrosine-protein kinase receptor. | 0.712 |
ENSPNYP00000019921 | bdnf | ENSPNYP00000019921 | ENSPNYP00000007061 | Sema domain-containing protein. | Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. | 0.876 |
ENSPNYP00000019921 | met | ENSPNYP00000019921 | ENSPNYP00000002529 | Sema domain-containing protein. | MET proto-oncogene, receptor tyrosine kinase. | 0.867 |
ENSPNYP00000019921 | mst1r | ENSPNYP00000019921 | ENSPNYP00000020740 | Sema domain-containing protein. | Macrophage stimulating 1 receptor b. | 0.871 |
ENSPNYP00000019921 | ngfr | ENSPNYP00000019921 | ENSPNYP00000017870 | Sema domain-containing protein. | Nerve growth factor receptor a (TNFR superfamily, member 16). | 0.526 |
ENSPNYP00000019921 | ntrk3 | ENSPNYP00000019921 | ENSPNYP00000011164 | Sema domain-containing protein. | Tyrosine-protein kinase receptor. | 0.712 |
ENSPNYP00000019921 | tie1 | ENSPNYP00000019921 | ENSPNYP00000022384 | Sema domain-containing protein. | Tyrosine kinase with immunoglobulin-like and EGF-like domains 1. | 0.603 |
ENSPNYP00000019946 | ENSPNYP00000019921 | ENSPNYP00000019946 | ENSPNYP00000019921 | Protein kinase domain-containing protein. | Sema domain-containing protein. | 0.909 |
ENSPNYP00000019946 | LOC102210486 | ENSPNYP00000019946 | ENSPNYP00000021299 | Protein kinase domain-containing protein. | NGF domain-containing protein; Belongs to the NGF-beta family. | 0.881 |
ENSPNYP00000019946 | LOC102212172 | ENSPNYP00000019946 | ENSPNYP00000007753 | Protein kinase domain-containing protein. | Tyrosine-protein kinase receptor. | 0.712 |
ENSPNYP00000019946 | bdnf | ENSPNYP00000019946 | ENSPNYP00000007061 | Protein kinase domain-containing protein. | Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. | 0.876 |
ENSPNYP00000019946 | met | ENSPNYP00000019946 | ENSPNYP00000002529 | Protein kinase domain-containing protein. | MET proto-oncogene, receptor tyrosine kinase. | 0.867 |
ENSPNYP00000019946 | mst1r | ENSPNYP00000019946 | ENSPNYP00000020740 | Protein kinase domain-containing protein. | Macrophage stimulating 1 receptor b. | 0.867 |
ENSPNYP00000019946 | ngfr | ENSPNYP00000019946 | ENSPNYP00000017870 | Protein kinase domain-containing protein. | Nerve growth factor receptor a (TNFR superfamily, member 16). | 0.526 |
ENSPNYP00000019946 | ntrk3 | ENSPNYP00000019946 | ENSPNYP00000011164 | Protein kinase domain-containing protein. | Tyrosine-protein kinase receptor. | 0.712 |
ENSPNYP00000019946 | tie1 | ENSPNYP00000019946 | ENSPNYP00000022384 | Protein kinase domain-containing protein. | Tyrosine kinase with immunoglobulin-like and EGF-like domains 1. | 0.603 |
LOC102205795 | LOC102210486 | ENSPNYP00000014632 | ENSPNYP00000021299 | Nerve growth factor receptor b. | NGF domain-containing protein; Belongs to the NGF-beta family. | 0.953 |
LOC102205795 | LOC102212172 | ENSPNYP00000014632 | ENSPNYP00000007753 | Nerve growth factor receptor b. | Tyrosine-protein kinase receptor. | 0.568 |
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