STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102210785Teleost multiple tissue opsin 3b; Belongs to the G-protein coupled receptor 1 family. (373 aa)    
Predicted Functional Partners:
ENSPNYP00000018997
Uncharacterized protein.
    
  0.661
LOC102213139
Uncharacterized protein.
    
 0.614
LOC102213426
Guanine nucleotide binding protein (G protein), alpha 14a.
    
 0.614
LOC102192069
Guanine nucleotide binding protein (G protein), alpha 11b (Gq class).
    
 0.614
LOC102205713
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
    
 0.614
LOC102212032
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
    
  0.613
LOC102199155
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.609
arrb2
Arrestin, beta 2a.
   
 0.604
LOC102208996
Arrestin, beta 1.
   
 0.604
arr3
Arrestin 3.
   
 0.604
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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