STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNYP00000022893Glutamate receptor, ionotropic, kainate 4. (950 aa)    
Predicted Functional Partners:
LOC102207761
Uncharacterized protein.
  
 
0.828
grik1
Glutamate receptor, ionotropic, kainate 1b.
  
 
0.827
LOC102216115
Glutamate ionotropic receptor kainate type subunit 2.
  
 
0.827
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
  
 
0.826
LOC102193606
Glutamate receptor, ionotropic, kainate 1a.
  
 
0.826
LOC102209659
Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Ba; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
  
 
0.601
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
0.579
grin3b
Glutamate receptor, ionotropic, N-methyl-D-aspartate 3Bb; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
    
0.565
LOC102209996
Glutamate receptor, ionotropic, N-methyl D-aspartate 1b.
   
0.563
LOC102201489
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
0.563
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.