STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102201784Neuraminidase 1. (386 aa)    
Predicted Functional Partners:
LOC102203440
Sialidase 3 (membrane sialidase), tandem duplicate 1.
  
  
0.875
neu4
Sialidase 4.
     
0.865
glb1
Beta-galactosidase.
  
 0.854
glb1l
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
  
 0.851
gla
Alpha-galactosidase.
     
 0.846
ercc3
Excision repair cross-complementation group 3.
  
    0.833
LOC102197618
Arylsulfatase A.
    
 0.833
ENSPNYP00000006155
Sulfatase domain-containing protein.
    
 0.833
galc
Galactosylceramidase b.
     
 0.816
LOC102205025
Neuraminidase 1.
  
  
 
0.809
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.