STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl14Mitochondrial ribosomal protein L14. (148 aa)    
Predicted Functional Partners:
ENSPNYP00000013858
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.981
mrps12
Mitochondrial ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.980
chchd1
Coiled-coil-helix-coiled-coil-helix domain containing 1.
   
   0.979
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.973
tp53i13
Uncharacterized protein.
   
   0.966
mrpl40
Mitochondrial ribosomal protein L40.
   
   0.966
mrpl54
Mitochondrial ribosomal protein L54.
   
   0.966
mrps16
Mitochondrial ribosomal protein S16.
   
 
 0.962
MRPL58
Mitochondrial ribosomal protein L58.
   
 
 0.955
mrpl41
Mitochondrial ribosomal protein L41.
   
   0.953
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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