STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPNYP00000025755zf-C3HC4 domain-containing protein. (51 aa)    
Predicted Functional Partners:
tradd
Tnfrsf1a-associated via death domain.
    
 0.972
LOC102200009
Tumor necrosis factor receptor superfamily, member 1a.
    
 0.971
mavs
CARD_2 domain-containing protein.
    
 0.964
LOC102196561
CD40 molecule, TNF receptor superfamily member 5.
   
 0.948
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.947
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.943
birc2
Baculoviral IAP repeat containing 2.
   
 0.923
LOC102213412
X-linked inhibitor of apoptosis.
   
 0.920
LOC102197439
Mitogen-activated protein kinase kinase kinase 14a.
    
 0.918
LOC102214382
ADP-ribosylation factor 2b.
    
 0.918
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.