STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lrit3Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a. (622 aa)    
Predicted Functional Partners:
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
0.929
LOC106456141
Im:7152348.
   
 0.902
ENSPNYP00000008811
Vav 3 guanine nucleotide exchange factor b.
    
 0.892
ntng1
Netrin g1a.
    
 0.892
ENSPNYP00000018997
Uncharacterized protein.
    
  0.888
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.867
LOC102208611
Interleukin-1.
   
 0.851
ENSPNYP00000014360
VWFA domain-containing protein.
    
  0.825
ENSPNYP00000014375
LAM_G_DOMAIN domain-containing protein.
    
  0.825
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.814
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.