STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102213720Elastin microfibril interfacer 1a. (1018 aa)    
Predicted Functional Partners:
ENSPNYP00000018997
Uncharacterized protein.
    
  0.737
LOC102206298
Zgc:154055.
    
   0.646
mtmr9
Myotubularin related protein 9.
    
   0.646
ENSPNYP00000015162
C1q domain-containing protein.
   
 
0.558
tep1
Uncharacterized protein.
    
  0.554
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.510
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
  0.489
det1
DET1 partner of COP1 E3 ubiquitin ligase.
    
  0.489
rps27a
Ribosomal protein S27a.
    
  0.475
setdb1
SET domain bifurcated histone lysine methyltransferase 1b.
    
  0.465
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.