STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102196793ArfGAP with coiled-coil, ankyrin repeat and PH domains 1. (722 aa)    
Predicted Functional Partners:
arfgap1
ADP-ribosylation factor GTPase activating protein 1.
   
0.790
rab35
RAB35, member RAS oncogene family b.
    
 
 0.717
LOC102206392
Si:dkey-16l2.16.
    
 
 0.717
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.675
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.675
ARF6
ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.672
ENSPNYP00000030492
Uncharacterized protein.
    
 0.672
arl15
ADP-ribosylation factor-like 15a.
    
 0.638
arfgap3
ADP-ribosylation factor GTPase activating protein 3.
    
0.632
arfgap2
ADP-ribosylation factor GTPase activating protein 2.
    
0.632
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.