STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102202481Protein phosphatase, Mg2+/Mn2+ dependent, 1F. (334 aa)    
Predicted Functional Partners:
tab3
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
    
 0.680
tab2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
    
 0.680
ikbkg
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.657
optn
Optineurin.
    
 0.657
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.645
LOC102212050
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.643
LOC106456141
Im:7152348.
  
 0.643
ENSPNYP00000004931
Protein kinase domain-containing protein.
   
 0.635
ENSPNYP00000004959
Zgc:171775.
   
 0.635
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
 
 
 0.635
Your Current Organism:
Pundamilia nyererei
NCBI taxonomy Id: 303518
Other names: Haplochromis nyererei, P. nyererei
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.